BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H09SP1|AL429484
(467 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1605 827 0.0
>3x_Contig1605
Length = 12373
Score = 827 bits (412), Expect = 0.0
Identities = 426/436 (97%)
Strand = Plus / Minus
Query: 32 gtcggtctgaagcataaatcttgatagctgatattttcagtggacaagaggttttccgtg 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6778 gtcggtctgaagcataaatcttgatagctgatattttcagtggacaagaggttttccgtg 6719
Query: 92 attaggttttcagtttcaaaccaccattttaggttctcatagctcaaaacaggaccggta 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6718 attaggttttcagtttcaaaccaccattttaggttctcatagctcaaaacaggaccggta 6659
Query: 152 tcattgacgawgaaaaccagyycggtcctatagaacggaccgaaattagcatcaaagtgt 211
|||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 6658 tcattgacgatgaaaacctgttcggtcctatagaacggaccgaaattagcatcaaagtgt 6599
Query: 212 gttttttctttgaatttcggggagcttggatagacccaaagattcacaggatccgtttcc 271
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6598 gttttttctttgaatttcggggagcttggattgacccaaagattcacaggatccgtttcc 6539
Query: 272 aaatcaccaaawamwattaabgctatcaaaagaattgtaataaaaatagccgagtaagat 331
||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6538 aaatcaccaaatactattaaggctatcaaaagaattgtaataaaaatagccgagtaagat 6479
Query: 332 aacacggtaataggatttttgatgcaggcggccacagtgttcgaaagaacgtccgagatt 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6478 aacacggtaataggatttttgatgcaggcggccacagtgttcgaaagaacgtccgagatt 6419
Query: 392 ttatcattcatagcgtttctttcggtggcatattctacgaataggccatcatcaatatct 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6418 ttatcattcatagcgtttctttcggtggcatattctacgaataggccatcatcaatatct 6359
Query: 452 gaattggcagcgtwac 467
||||||||||||| ||
Sbjct: 6358 gaattggcagcgttac 6343
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3421
Number of Sequences: 1807
Number of extensions: 3421
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 467
length of database: 10,358,551
effective HSP length: 15
effective length of query: 452
effective length of database: 10,331,446
effective search space: 4669813592
effective search space used: 4669813592
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.9 bits)